Xiaoju DONG's Publications
- Xiaoju Dong. Axoimatization Systems of the Asymmetric Chi
Calculus with Mismatch. Ph.D dissertation. Department of Computer
Science, Shanghai Jiao Tong University, Shanghai, China. 2004. (in
Chinese with English abstract)
- Chunyi Huang, Xiaoju Dong. Maximally parallel attribute on
P systems: properties and applications. Pre-proceedings of the
International Conference Bio-Inspired Computing--Theory and
Applications, 2007. Also in Progress in Natural Science. 2008, 18(5):
629-632.
- Chunyi Huang, Xiaoju Dong, Huan Long. Solving the sort
problem using a P system. Journal of Shanghai Jiao Tong University,
2008, 42(2): 206-208. (in Chinese with English abstract)
- Xian Xu, Xiaoju Dong. Study on a new variant of tissue P
systems. Science of Computer, 2008. (in Chinese with English
abstract)
- Min Zhang, Zhengwei Qi, Xiaoju Dong. Executable
Specification of P Systems with Active Membranes and Its
Implementation. Journal of Shanghai Jiao Tong University, 2008. (in
Chinese with English abstract)
- Qing Zhuang, Xiaojuan Cai, Xiaoju Dong, Zhengwei Qi. A
Verification Tool for Security Protocol on GSPM. Computer
Engineering. 2008. (in Chinese with English abstract)
- Xiaoju Dong, Yuxi Fu. Barbed Congruence of Asymmetry and
Mismatch. Journal of Computer Science and Technology, 22(4), 2007:
575-579.
- Xian Xu, Xiaoju Dong and Yuxi Fu. A Model in kappa for DNA
Addition. Proceedings of Workshop on Membrane Computing and
Biologically Inspired Process Calculi, July 9, 2006 (MeCBIC2006). Also
in Electronic Notes in Theoretical Computer Science, 171(2), 2007:
209-222.
- Yang Pu, Xiaoju Dong. Continuous simulation of biomolecular
systems based on process calculus. In Proc. of International Symposium
on Artificial Life and Robotics, Oita, Japan, January 25-27,
2007.
- Dan Li, Min Zhang, Xiaoju Dong. κ-Calculus Model for
the Life-Cycle of Lambda Phage. Journal of Shanghai Jiao Tong
University. 2007: 42-22. (in Chinese with English abstract)
- Xiaoju Dong and Yuxi Fu. Barbed Congruence of the
Asymmetric Chi Calculus. Journal of Harbin Institute of Technology,
13(4), 2006: 444-451.
- Xiaoju Dong, Jiahua Ni, Yuxi Fu. Modeling the biological
and chemical reactive processes using process calculi. The Annual
Conference of Theoretical Computer Science of China, 2006. (in
Chinese)
- Yang Pu, Xiaoju Dong. The simulation and analysis of the
tile self-assemble. The Annual Conference of Theoretical Computer
Science of China, 2006. (in Chinese).
- Yang Pu, Yanbin Yu, Xiaoju Dong. Simulation of biomolecular
processes by using stochastic P systems. In Proc. of International
Workshop on High Performance Computing in the Life Sciences (HPCLife),
Ouro Preto, Brazil, 2006.
- Farong Zhong, Yuxi Fu, Xiaoju Dong. Bisimulation Congruence
for Asymmetric χ≠-Calculus. Proceedings-Fifth
International Symposium on Parallel and Distributed Computing,2006:
173-184.
- Yonggen Gu, Yuxi Fu, Yang Li, Xiaoju Dong. A Generic Model
for Symbolic Analyzing Security Protocols. CIT 2005, IEEE, 2005:
680-684.
- Xiaoju Dong, Yuxi Fu, Xu Xian. A Survey of Systems Biology
Formal Models. The Annual Conference of Theoretical Computer Science
of China. 2005. (in Chinese)
- Zhupeng Dong, Xiaoju Dong, Xian Xu, Yuxi Fu, Zhizhou Zhang,
Lin He. An Implementation for Mapping SBML to BioSPI. FSKD(2), Lecture
Notes in Computer Science, LNAI 3614, 2005: 1128-1131.
- Zhupeng Dong, Xiaoju Dong,Jiahua Ni. Research on Systems
Biology Models Conversion. Journal of Shanghai Jiao Tong University,
39(8), 2005: 1280–1283. (in Chinese with English Abstract)
- Yuxi Fu, Xiaoju Dong. Formalizing the Environment View of
Process Equivalence. The International Symposium on Computational and
Information Sciences (CIS'04), Shanghai, December 16-18, Lecture Notes
in Computer Science 3314, 2004: 336-345.
- Xiaoju Dong, Farong Zhong and Yuxi Fu. Bisimulation Lattice
of Asymmetric Chi Calculus with Mismatch. High Technology Letters,
9(4), 2003: 50-55.
- Xiaoju Dong and Yuxi Fu. Observing Asymmetry and
Mismatch. In A Ohori, APLAS 2003, Lecture Notes in Computer Science
2895, Springer-Verlag, Nov. 27-29, Beijing, China, 2003: 2-19.